to reset the windows
press switch down untill window fully open
release switch for one second
press switch down again and hold in down position for five seconds
repeat for up position and any other windows that require reseting
this should reset the windows and global closing.
Thanks Mintalkin, worked like a charm, thought I would have to lay out more money on my car :)
for guys with the MK4, you need to press and hold down, when it stops going down - hold the button for a further 5 seconds then let go, then roll the window up and when it stops, hold on for another 5 seconds then let go. This may need to be done for all the windows.